I don't know how to slow down the game speed overall, but you can stop the scrolling nightmare by changing the preference of 'scroll when mouse hits edge of screen' or however it is worded. That way, it doesn't automatically scroll, you have to click on the mouse to recenter the map. I think there's another preference for fast enemy moves, but they may have been only Civ2 and not SMAC.
I get quite seasick playing certain computer games, so I can certainly understand where you're coming from. We currently have my 1 gig Athlon running at 750 for heating issues, and it's smooth and not too fast, I love it. But you probably play other games that I can't play because of seasickness [anything like Quake, Tribes, Black and White, forget it].
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