Actually, yes. My roommate and I have experienced all of these problems in our past CTP2 games. To this date, we still have NOT been able to actually finish a CTP2 game!
My roommate and I both have our own CTP2 CD and there was still the problem with the listening posts not "seeing" and the scewed research times. We are currently in a game using the latest Apolyton Mod (latest version). The game so far
seems stable enough. We haven't gotten to the point of the game to build listening posts, so I haven't been able to check that out yet.
Hopefully my roommate and I can get back to our game in the next few weeks. I'm hopeing that we won't have any
MAJOR problems, but my past experiences with CTP2 hasn't been very good to say the least!